Biodiesel blends (B7, B20, B100) were evaluated in a Stage V-compliant SCR on Filter (SCRoF) system for heavy-duty applications to quantify soot reactivity and filter regeneration capability. Compared to conventional diesel (B7), B20 showed slightly faster regeneration performance under real-driving conditions, while B100 resulted in reduced particulate formation and higher soot reactivity, with more intense exothermic events requiring careful management. These differences are attributed to the distinct physical-chemical properties of the fuels (oxygen content, lower heating value) and their interaction with Diesel Oxidation Catalyst (DOC)/SCRoF. All tests were conducted on an engine dynamometer with a Cursor 9 FPT (Fiat Powertrain). Findings are discussed in the context of EU Stage V limits and practical control strategies for heavy-duty applications.